Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827776.1_cds_XP_016503188.1_16756
CDS Infomation

[gene=LOC107821274] [db_xref=GeneID:107821274] [protein=beta-adaptin-like protein A] [protein_id=XP_016503188.1] [location=join(28119..28171,28724..29240,32324..32448,34586..34784,38061..38289,39565..39731,39905..40114,40701..40811,40993..41169,41301..41744,41840..42130)] [gbkey=CDS]
Sequence

ATGGCTCCTCCAGCTCAAACTCATCGATCTCCTTCACCTTCTCAACCTTCCGGAAAAGGG
GAAGTTTCAGATTTGAAGATGCAGCTTAGGCAGCTGGCAGGTAGCCGAGCTCCCGGGACT
GATGATGCAAAGAGGGAGCTGTTCAAGAAGGTGATCTCGTGTATGACAATTGGGATTGAC
GTTTCTTCAGTTTTCAGCGAAATGGTTATGTGCTCAGCAACCTCAGATATTGTTCTAAAA
AAGATGTGCTACCTTTATGTTGGGAACTATGCTAAAAACAACCCAGAACTCGCGCTTTTG
ACCATTAACTTTCTTCAGAAGGACTGCAAAGATGAGGATCCCATGATTCGCGGTTTGGCT
CTAAGGAGCTTGTGTTCTCTGCGGGTCACAAATTTGGTCGAGTATTTGGTCGGCCCCTTG
GGTTTAGGGTTGAAGGATTCAAATAGCTATGTCAGGACAGTTGCAGCCATTGGTGTTTTG
AAGTTGTACCATATCTCAGCATCAACTTGCATGGATGCGGATTTTCTTGTCACGCTTAAG
CATTTGATGCTTAATGATCGAGATGCTCAGGTTGTAGCCAACTGCTTGTGTTCCCTACAG
GAAATCTGGGGTTTGGAAGCAACAAAATCTGAGGAAGCTTCAACAGAAAGAGAAACACTA
TTAAGCAAGCCACTTATTTATTACCTTTTGAATAGGTTCAAGGAATTCAGTGAATGGGCT
CAATGTGCTGTTCTTGATTTGGTTTCAAAGTATGTGCCTGCTGACAATAATGAGATATTT
GACATGATGAATCTTCTTGAAGATAGGCTTCAACATGCTAATGGTGCTGTTGTCTTGGCA
ACAATCAAGTTATTTTTACAACTGACACTCTCTATGGCTGACATTCATCAACAGGTGTAT
GAGCGTATAAAAGCACCTCTCCTTACATTAGTTAGCTCAGGAGGTCCAGAGCAATCCTAT
GCTGTGTTAAGCCATCTACATTTGCTGGTGATGCGTGCACCATATATTTTTTCAGCAGAC
TACAAGCACTTCTACTGCCAATACAATGAGCCGTTTTATGTCAAAAAGCTAAAACTTGAG
ATGCTGACTGCTGTGGCAAATGAGAGCAATACATATGAAATTGTGACGGAGCTATGTGAA
TATGCTGCTAATGTTGACATTCCCATGGCGAGAGAGTCGATCAGGGCTGTTGGCAAAATA
GCATTACAACAGTATGATGTTAATGCTATTGTAGATAGGCTGCTCCAGTTTTTGGAAATG
GAGAAAGACCATGTGACTGCAGAAACTCTGGTACTTGTGAAAGATCTCCTTAGGAAATAT
CCTCAATGGAGTCATGATTGTATAGCAGTAGTAGGGAATATTAGTAGCAAAAATGTCCAG
GAACCCAAAGCCAAGGCAGCTCTTATTTGGATGTTAGGGGAATATGCTCAAGACATGCAA
GATGCTCCATACGTATTGGAGAGTCTTGTTGAGAATTGGGAAGAGGAGCATTCTGCAGAG
GTTCGTTTACATCTTCTTACAGCAGTAGTGAAGTGCTTTTTCAGAAGACCACCAGAGACT
CAGAAAGCCTTGGGAGCTGCATTAGCTGCTGGTGTTAATGATTTTCATCAGGATGTCCAT
GACAGGGCATTATTATACTATAGACTTCTACAGTACAATGTCTCCGTAGCAGAGCGTGTG
GTGAATCCTCCAAAGCAAGCTGTTTCTGTCTTTGCTGATACACAAAGTAATGAAATTAAA
GATCGCATCTTTGATGAGTTTAACAGCCTCTCTGTTGTTTATCAAAAGCCTTCTTACATG
TTCACCGATAAGGAACATAGAGGGCCGTTTGCCTTCTCTGAGGAAATTGGAAATTTATCT
ATTGGGGCAGAACCGACTGATAATGTAGTCCCAGCGCAGAGAATCGAGGCAAATGACAAG
GATTTACTTTTGAGTACTTCAGATAAAGAAGAAAGTAAAGGTTCTAGTCACAATGGTTCT
GCATATAGTGCTCCTGGATATGATGGTTCTTTGGCTGCACCATCTCAAACTGATCTTGTT
TCCTTGGATTACAAATCTACTCCAAGTGCGGCATCAACTACTTCGGCAATCGATGATTTA
CTTGGTCTTGGTTTGCCTGCTGCAGCTAGCTCTCCTCCTCCGCCTCCTGTTTTGAAGCTC
AATACTAAAGCTGTTTTAGATCCCAACACTTTCCAGCAGAAATGGCGTCAACTGCCAATA
TCAATATCACAGGAAACCTCTATTAGTCCACAAGGCGTGGCAGCAATGACAACTCCTCAA
GCGCTTATCCGTCACATGCAAGGCCATTCAATCCACTGCATAGCTTCCGGTGGTCAAGCT
CCAAACTTCAAGTTCTTCTTCTATGCACAAAAAGCAGAGGAACCGTATACCTATCTTGTA
GAATGTATAGTTAATTCATCATCGTGTAAAGTACAGTTAAAGATCAAAGCTGATGATCAG
AGTACATCTCAGGCCTTCTCAGAATTGTTCCAGTCAGCCTTGTCCAAATTCGGTTTTTCA
TAG

Peptide Sequence

PEP ID

XP_016503188.1
PEP Infomation

PREDICTED: beta-adaptin-like protein A [Nicotiana tabacum]
Sequence

MAPPAQTHRSPSPSQPSGKGEVSDLKMQLRQLAGSRAPGTDDAKRELFKKVISCMTIGID
VSSVFSEMVMCSATSDIVLKKMCYLYVGNYAKNNPELALLTINFLQKDCKDEDPMIRGLA
LRSLCSLRVTNLVEYLVGPLGLGLKDSNSYVRTVAAIGVLKLYHISASTCMDADFLVTLK
HLMLNDRDAQVVANCLCSLQEIWGLEATKSEEASTERETLLSKPLIYYLLNRFKEFSEWA
QCAVLDLVSKYVPADNNEIFDMMNLLEDRLQHANGAVVLATIKLFLQLTLSMADIHQQVY
ERIKAPLLTLVSSGGPEQSYAVLSHLHLLVMRAPYIFSADYKHFYCQYNEPFYVKKLKLE
MLTAVANESNTYEIVTELCEYAANVDIPMARESIRAVGKIALQQYDVNAIVDRLLQFLEM
EKDHVTAETLVLVKDLLRKYPQWSHDCIAVVGNISSKNVQEPKAKAALIWMLGEYAQDMQ
DAPYVLESLVENWEEEHSAEVRLHLLTAVVKCFFRRPPETQKALGAALAAGVNDFHQDVH
DRALLYYRLLQYNVSVAERVVNPPKQAVSVFADTQSNEIKDRIFDEFNSLSVVYQKPSYM
FTDKEHRGPFAFSEEIGNLSIGAEPTDNVVPAQRIEANDKDLLLSTSDKEESKGSSHNGS
AYSAPGYDGSLAAPSQTDLVSLDYKSTPSAASTTSAIDDLLGLGLPAAASSPPPPPVLKL
NTKAVLDPNTFQQKWRQLPISISQETSISPQGVAAMTTPQALIRHMQGHSIHCIASGGQA
PNFKFFFYAQKAEEPYTYLVECIVNSSSCKVQLKIKADDQSTSQAFSELFQSALSKFGFS

Transcript Sequence

Gene sequence data has not been registered.